Description: <short summary of the patch>
 TODO: Put a short summary on the line above and replace this paragraph
 with a longer explanation of this change. Complete the meta-information
 with other relevant fields (see below for details). To make it easier, the
 information below has been extracted from the changelog. Adjust it or drop
 it.
 .
 samtools (1.2-1) UNRELEASED; urgency=medium
 .
   a5f28a0 Merge tag '1.2' into debian/unstable
   c542e84 Build-depend on libhts-dev 1.2.
   6c2d9cd Build-depend and recommend libio-pty-perl.
           (Needed for the regression tests.)
   23e44a4 Removed fix_coverage_cap.patch, obsoleted by -d option.
   1091aab Refreshed fuzzy patches.
Author: Charles Plessy <plessy@debian.org>

---
The information above should follow the Patch Tagging Guidelines, please
checkout http://dep.debian.net/deps/dep3/ to learn about the format. Here
are templates for supplementary fields that you might want to add:

Origin: <vendor|upstream|other>, <url of original patch>
Bug: <url in upstream bugtracker>
Bug-Debian: https://bugs.debian.org/<bugnumber>
Bug-Ubuntu: https://launchpad.net/bugs/<bugnumber>
Forwarded: <no|not-needed|url proving that it has been forwarded>
Reviewed-By: <name and email of someone who approved the patch>
Last-Update: <YYYY-MM-DD>

--- /dev/null
+++ samtools-1.2/.travis.yml
@@ -0,0 +1,18 @@
+# Control file for continuous integration testing at http://travis-ci.org/
+
+language: c
+compiler:
+  - clang
+  - gcc
+
+matrix:
+  include:
+    # An unoptimised C99 build, for detecting non-static inline functions
+    - compiler: gcc
+      env: CFLAGS="-std=gnu99 -O0"
+
+before_script:
+  - git clone --depth=5 --branch=develop git://github.com/samtools/htslib.git
+  - export HTSDIR=./htslib
+
+script: make -e && make -e test
--- /dev/null
+++ samtools-1.2/README.md
@@ -0,0 +1,13 @@
+samtools
+========
+
+This is the official development repository for samtools.
+
+The original samtools package has been split into three separate
+but tightly coordinated projects:
+- [htslib](https://github.com/samtools/htslib): C-library for handling high-throughput sequencing data
+- samtools: mpileup and other tools for handling SAM, BAM, CRAM
+- [bcftools](https://github.com/samtools/bcftools): calling and other tools for handling VCF, BCF
+
+See also http://github.com/samtools/
+
