ontology: EDAM (1.33)
topic: 
  - Sequence analysis
scopes: 
  - name: summary
    function: 
     - Genome alignment
    inputs: 
     - data: Raw sequence
       formats:
       - FASTQ
     - data: DNA sequence (raw)
       formats:
       - FASTA
     - data: Genome annotation
       formats:
       - GTF
    outputs:
     - data: Sequence alignment (nucleic acid) 
       formats: 
       - SAM
       - BAM
     - data: Report
       - Text
