Hierarchy For Package vcf

Package Hierarchies:

• All Packages

Class Hierarchy

• java.lang.Object
  • vcf.AllData (implements vcf.Data)
  • vcf.BasicGT (implements vcf.GT)
  • vcf.BasicMarker (implements vcf.Marker)
  • vcf.BasicRefGT (implements vcf.RefGT)
  • vcf.BitSetGT (implements vcf.GTRec)
  • vcf.FilterUtil
  • vcf.IntervalVcfIt<E> (implements blbutil.SampleFileIt<E>)
  • vcf.LowMafRefDiallelicGT (implements vcf.RefGTRec)
  • vcf.LowMafRefGT (implements vcf.RefGTRec)
  • vcf.MarkerMap (implements vcf.GeneticMap)
  • vcf.Markers
  • vcf.PhasedGTWrapper (implements vcf.PhasedGT)
  • vcf.PlinkGenMap (implements vcf.GeneticMap)
  • vcf.PositionMap (implements vcf.GeneticMap)
  • vcf.R2Estimator
  • vcf.RefIt (implements blbutil.SampleFileIt<E>)
  • vcf.RestrictedVcfWindow (implements java.io.Closeable)
  • vcf.SeqCodedRefGT (implements vcf.RefGTRec)
  • vcf.SplicedGT (implements vcf.GT)
  • vcf.TargetData (implements vcf.Data)
  • vcf.VcfHeader
  • vcf.VcfIt<E> (implements blbutil.SampleFileIt<E>)
  • vcf.VcfMetaInfo
  • vcf.VcfRecBuilder
  • vcf.VcfRecGTParser
  • vcf.VcfRecord (implements vcf.GTRec)
  • vcf.VcfWriter
  • vcf.Window<E>
  • vcf.WindowIt<E> (implements blbutil.SampleFileIt<E>)
  • vcf.XBasicGT (implements vcf.GT)
  • vcf.XBasicGT1 (implements vcf.XGT1)

Interface Hierarchy

• java.lang.AutoCloseable
  • java.io.Closeable
    • vcf.Data
• java.lang.Comparable<T>
  • vcf.Marker
• vcf.GeneticMap
• vcf.GT
  • vcf.PhasedGT
    • vcf.RefGT
• vcf.MarkerContainer
  • vcf.DuplicatesGTRec
    • vcf.GTRec
      • vcf.RefGTRec
• vcf.XGT1