Home
Trees
Indices
Help
CSB
[
frames
] |
no frames
]
[
Identifiers
|
Bugs
|
Deprecations
]
Identifier Index
[
A
B
C
D
E
F
G
H
I
J
K
L
M
N
O
P
Q
R
S
T
U
V
W
X
Y
Z
_
]
R
r
(in
Color
)
regression()
(in
csb.test
)
RevisionError
(in
csb.build
)
R
(in
AbstractStructureMixture
)
RegressionTestBuilder
(in
csb.test
)
RevisionHandler
(in
csb.build
)
Ra
(in
ChemElements
)
RegularStructureParser
(in
csb.bio.io.wwpdb
)
RevisionInfo
(in
csb.build
)
rad()
(in
TorsionAngles
)
reject()
(in
FragmentCluster
)
Rf
(in
ChemElements
)
rad()
(in
csb.bio.utils
)
rejections
(in
ClusterRep
)
Rg
(in
ChemElements
)
radian2degree()
(in
csb.numeric
)
RELATIVE_SA
(in
csb.bio.hmm
)
Rh
(in
ChemElements
)
Radians
(in
AngleUnits
)
REMARK
(in
Tags
)
RichSequence
(in
csb.bio.sequence
)
radius_of_gyration()
(in
csb.bio.utils
)
REMatchProxy
(in
csb.core
)
rmsd
(in
FragmentMatch
)
rand
(in
csb.statistics
)
RemoteStructureProvider
(in
csb.bio.io.wwpdb
)
RMSD
(in
Metrics
)
random()
(in
AbstractDensity
)
remove()
(in
ClansSeqgroup
)
rmsd()
(in
csb.apps.precision
)
random()
(in
Dirichlet
)
remove()
(in
CustomStructureProvider
)
rmsd()
(in
Chain
)
random()
(in
Gamma
)
remove()
(in
FileSystemStructureProvider
)
rmsd()
(in
TorsionAnglesCollection
)
random()
(in
GeneralizedInverseGaussian
)
remove()
(in
StructureChainsTable
)
rmsd()
(in
csb.bio.utils
)
random()
(in
GumbelMaximum
)
remove_entry()
(in
Clans
)
rmsd_consistency()
(in
TargetSegment
)
random()
(in
GumbelMinimum
)
remove_entry_by_name()
(in
Clans
)
rmsd_cur()
(in
csb.bio.utils
)
random()
(in
InverseGamma
)
remove_group()
(in
Clans
)
rmsd_entropy()
(in
TargetSegment
)
random()
(in
InverseGaussian
)
remove_hsp()
(in
ClansEntry
)
rmsd_to()
(in
Assignment
)
random()
(in
Laplace
)
RENSSwapCommunicator
(in
csb.statistics.samplers.mc
)
Rn
(in
ChemElements
)
random()
(in
MultivariateGaussian
)
RENSTrajInfo
(in
csb.statistics.samplers.mc
)
RNA
(in
SequenceTypes
)
random()
(in
Normal
)
repfactor
(in
ClansParams
)
ROOT
(in
csb.build
)
random()
(in
ScaleMixture
)
ReplicaExchangeMC
(in
csb.statistics.samplers.mc.multichain
)
Rosetta
(in
FragmentTypes
)
RANDOM_RMSD
(in
csb.bio.fragments
)
RepositoryImp
(in
csb.io.tsv
)
rosetta
(in
csb.bio.fragments
)
random_rotation()
(in
csb.statistics.rand
)
RepStructureFragment
(in
csb.bio.fragments.isites
)
RosettaFragment
(in
csb.bio.fragments.rosetta
)
RandomCoil
(in
csb.bio.nmr
)
repvalpow
(in
ClansParams
)
RosettaFragmentMap
(in
csb.bio.fragments.rosetta
)
randomize_means()
(in
GaussianMixture
)
reRaise()
(in
Case
)
RosettaFragsetFactory
(in
csb.bio.fragments
)
randomize_scales()
(in
GaussianMixture
)
residue
(in
HMMLayer
)
rotation_matrix()
(in
csb.numeric
)
rank
(in
HHpredHit
)
residue
(in
Atom
)
rotmtx
(in
Clans
)
rank
(in
HMMLayer
)
Residue
(in
csb.bio.structure
)
rows
(in
AbstractAlignment
)
rank
(in
State
)
residue()
(in
AssignmentFactory
)
rows
(in
Chart
)
rank
(in
ResidueInfo
)
ResidueAssignmentInfo
(in
csb.bio.fragments
)
Ru
(in
ChemElements
)
rank
(in
Residue
)
ResidueAssignmentInfo
(in
csb.bio.io.dssp
)
run()
(in
AppRunner
)
Rb
(in
ChemElements
)
ResidueAtomsTable
(in
csb.bio.structure
)
run()
(in
ProfileBuilder
)
Re
(in
ChemElements
)
ResidueEventInfo
(in
csb.bio.fragments
)
run()
(in
Deconvolution
)
read()
(in
RosettaFragmentMap
)
ResidueInfo
(in
csb.bio.fragments.rosetta
)
run()
(in
DeconvolutionApp
)
read()
(in
BaseSequenceParser
)
ResidueInfo
(in
csb.bio.sequence
)
run()
(in
HHsearch
)
read()
(in
DensityMapReader
)
residues
(in
Target
)
run()
(in
LibrarySuperimposer
)
read()
(in
MercurialHandler
)
residues
(in
RosettaFragment
)
run()
(in
ProcheckParser
)
read()
(in
RevisionHandler
)
residues
(in
ProfileHMM
)
run()
(in
WhatCheckParser
)
read()
(in
SubversionHandler
)
residues
(in
AbstractSequence
)
run()
(in
Console
)
read_a3m()
(in
SequenceAlignmentReader
)
residues
(in
AlignedSequenceAdapter
)
run()
(in
InterruptibleThread
)
read_fasta()
(in
SequenceAlignmentReader
)
residues
(in
Chain
)
run()
(in
Shell
)
read_header()
(in
DensityMapReader
)
resize()
(in
Backend
)
run()
(in
Backend
)
read_sequence()
(in
BaseSequenceParser
)
resolution
(in
Structure
)
run()
(in
Console
)
read_sequence()
(in
PDBSequenceParser
)
RESOURCES
(in
RandomCoil
)
run_once()
(in
Deconvolution
)
read_sequence()
(in
SequenceParser
)
restrict()
(in
Clans
)
runmany()
(in
HHsearch
)
readall()
(in
EntryReader
)
restrict_to_max_pvalue()
(in
Clans
)
running
(in
Backend
)
ReadOnlyCollectionContainer
(in
csb.core
)
result
(in
Context
)
running_average()
(in
csb.statistics
)
ReadOnlyDictionaryContainer
(in
csb.core
)
result
(in
InterruptibleThread
)
runstrict()
(in
Shell
)
reconstruct_header()
(in
DensityMapWriter
)
RESwapCommunicator
(in
csb.statistics.samplers.mc
)
RWMCPropagator
(in
csb.statistics.samplers.mc.propagators
)
recurrence
(in
SliceContext
)
RESwapParameterInfo
(in
csb.statistics.samplers.mc
)
RWMCSampler
(in
csb.statistics.samplers.mc.singlechain
)
register()
(in
OutputBuilder
)
reverse()
(in
csb.numeric
)
REGRESSION
(in
Attributes
)
revision
(in
Version
)
Home
Trees
Indices
Help
CSB
Generated by Epydoc 3.0.1 on Fri Jul 5 14:24:47 2013
http://epydoc.sourceforge.net