.. _data_links:

Data Files Used in the Documentation
====================================

All data files referred to in the documentation can be download by clicking on the links below.

.. note:: not all browsers handle the file suffixes well, so you may need to rename the downloaded files in order to use them.

:download:`abglobin_aa.phylip <data/abglobin_aa.phylip>`

:download:`dists_for_phylo.json <data/dists_for_phylo.json>`

:download:`long_testseqs.fasta <data/long_testseqs.fasta>`

:download:`primate_brca1.fasta <data/primate_brca1.fasta>`

:download:`primate_brca1.tree <data/primate_brca1.tree>`

:download:`primate_cdx2_promoter.fasta <data/primate_cdx2_promoter.fasta>`

:download:`test.paml <data/test.paml>`

:download:`test.tree <data/test.tree>`

:download:`test2.fasta <data/test2.fasta>`

:download:`trna_profile.fasta <data/trna_profile.fasta>`

:download:`refseqs.fasta <data/refseqs.fasta>`

:download:`refseqs_protein.fasta <data/refseqs_protein.fasta>`

:download:`inseqs.fasta <data/inseqs.fasta>`

:download:`inseqs_protein.fasta <data/inseqs_protein.fasta>`

:download:`SCA1-cds.fasta <data/SCA1-cds.fasta>`

:download:`SCA1-cds.fasta <data/tp53.json>`

:download:`brca1-bats.fasta <data/brca1-bats.fasta>`

:download:`brca1.fasta <data/brca1.fasta>`

:download:`GN-tree.json <data/GN-tree.json>`

:download:`tree-with-support.json <data/tree-with-support.json>`

:download:`F9-demo.fa <data/F9-demo.fa>`

:download:`BRCA1-demo.fasta <data/BRCA1-demo.fasta>`

:download:`tbp.jaspar <data/tbp.jaspar>`

:download:`stats.tsv <data/stats.tsv>`

:download:`CerebellumDukeDNaseSeq.pk <data/CerebellumDukeDNaseSeq.pk>`
