org.forester.go
Class PfamToGoParser

java.lang.Object
  org.forester.go.PfamToGoParser

public class PfamToGoParser
extends java.lang.Object

Constructor Summary

PfamToGoParser(java.io.File input_file)

Method Summary

int	getMappingCount()
boolean	isUseAccessors()
java.util.List<PfamToGoMapping>	parse()
void	setUseAccessors(boolean use_ids)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

PfamToGoParser

public PfamToGoParser(java.io.File input_file)

Method Detail

getMappingCount

public int getMappingCount()

isUseAccessors

public boolean isUseAccessors()

parse

public java.util.List<PfamToGoMapping> parse()
                                      throws java.io.IOException

Throws:

java.io.IOException

setUseAccessors

public void setUseAccessors(boolean use_ids)