org.forester.go
Interface GoTerm

All Superinterfaces:

java.lang.Comparable<GoTerm>, PhylogenyData

All Known Implementing Classes:

BasicGoTerm

public interface GoTerm
extends PhylogenyData, java.lang.Comparable<GoTerm>

Method Summary

java.util.List<GoId>	getAltIds()
java.lang.String	getComment()
java.lang.String	getDefinition()
GoId	getGoId()
GoNameSpace	getGoNameSpace()
java.util.List<GoRelationship>	getGoRelationships()
java.util.List<GoSubset>	getGoSubsets()
java.util.List<GoXRef>	getGoXRefs()
java.lang.String	getName()
java.util.List<GoId>	getSuperGoIds()
boolean	isObsolete()

Methods inherited from interface org.forester.phylogeny.data.PhylogenyData

asSimpleText, asText, copy, isEqual, toNHX, toPhyloXML

Methods inherited from interface java.lang.Comparable

compareTo

Method Detail

getAltIds

java.util.List<GoId> getAltIds()

getComment

java.lang.String getComment()

getDefinition

java.lang.String getDefinition()

getGoId

GoId getGoId()

getGoNameSpace

GoNameSpace getGoNameSpace()

getGoRelationships

java.util.List<GoRelationship> getGoRelationships()

getGoSubsets

java.util.List<GoSubset> getGoSubsets()

getGoXRefs

java.util.List<GoXRef> getGoXRefs()

getName

java.lang.String getName()

getSuperGoIds

java.util.List<GoId> getSuperGoIds()

isObsolete

boolean isObsolete()