org.biojava3.genome.query
Class BlastXMLQuery

java.lang.Object
  org.biojava3.genome.query.BlastXMLQuery

public class BlastXMLQuery
extends java.lang.Object

Author:

Scooter Willis

Constructor Summary

BlastXMLQuery(java.lang.String blastFile)

Method Summary

java.util.LinkedHashMap<java.lang.String,java.util.ArrayList<java.lang.String>>	getHitsQueryDef(double maxEScore)
static void	main(java.lang.String[] args)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

BlastXMLQuery

public BlastXMLQuery(java.lang.String blastFile)
              throws java.lang.Exception

Throws:

java.lang.Exception

Method Detail

getHitsQueryDef

public java.util.LinkedHashMap<java.lang.String,java.util.ArrayList<java.lang.String>> getHitsQueryDef(double maxEScore)
                                                                                                throws java.lang.Exception

Throws:

java.lang.Exception

main

public static void main(java.lang.String[] args)