org.biojava3.core.sequence
Enum DataSource

java.lang.Object
  java.lang.Enum<DataSource>
      org.biojava3.core.sequence.DataSource

All Implemented Interfaces:

java.io.Serializable, java.lang.Comparable<DataSource>

public enum DataSource
extends java.lang.Enum<DataSource>

 GenBank                           gi|gi-number|gb|accession|locus
 ENA Data Library                  gi|gi-number|emb|accession|locus
 DDBJ, DNA Database of Japan       gi|gi-number|dbj|accession|locus
 NBRF PIR                          pir||entry
 Protein Research Foundation       prf||name
 SWISS-PROT UNIPROT                sp|accession|name
 Brookhaven Protein Data Bank (1)  pdb|entry|chain
 Brookhaven Protein Data Bank (2)  entry:chain|PDBID|CHAIN|SEQUENCE
 Patents                           pat|country|number
 GenInfo Backbone Id               bbs|number
 General database identifier       gnl|database|identifier
 NCBI Reference Sequence           ref|accession|locus
 Local Sequence identifier         lcl|identifier
 




Author:
  
Scooter Willis 







Enum Constant Summary
DDBJ



           
ENA



           
GENBANK



           
GENERAL



           
GENINFO



           
LOCAL



           
NBRF



           
NCBI



           
PATENTS



           
PDB1



           
PDB2



           
PDBe



           
PFAM



           
PRF



           
UNIPROT



           
UNKNOWN



           
 



Method Summary




static DataSource
valueOf(java.lang.String name)



          Returns the enum constant of this type with the specified name.



static DataSource[]
values()



          Returns an array containing the constants of this enum type, in
the order they are declared.


 
Methods inherited from class java.lang.Enum
clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf
 
Methods inherited from class java.lang.Object
getClass, notify, notifyAll, wait, wait, wait
 





Enum Constant Detail



GENBANK
public static final DataSource GENBANK







ENA
public static final DataSource ENA







DDBJ
public static final DataSource DDBJ







NBRF
public static final DataSource NBRF







PRF
public static final DataSource PRF







PDB1
public static final DataSource PDB1







PDB2
public static final DataSource PDB2







PDBe
public static final DataSource PDBe







PATENTS
public static final DataSource PATENTS







GENINFO
public static final DataSource GENINFO







GENERAL
public static final DataSource GENERAL







NCBI
public static final DataSource NCBI







UNIPROT
public static final DataSource UNIPROT







PFAM
public static final DataSource PFAM







LOCAL
public static final DataSource LOCAL







UNKNOWN
public static final DataSource UNKNOWN








Method Detail



values
public static DataSource[] values()

Returns an array containing the constants of this enum type, in
the order they are declared.  This method may be used to iterate
over the constants as follows:
for (DataSource c : DataSource.values())
    System.out.println(c);




Returns:
an array containing the constants of this enum type, in
the order they are declared





valueOf
public static DataSource valueOf(java.lang.String name)

Returns the enum constant of this type with the specified name.
The string must match exactly an identifier used to declare an
enum constant in this type.  (Extraneous whitespace characters are 
not permitted.)


Parameters:
name - the name of the enum constant to be returned.
Returns:
the enum constant with the specified name
Throws:
java.lang.IllegalArgumentException - if this enum type has no constant
with the specified name
java.lang.NullPointerException - if the argument is null