Package org.biojava3.alignment.io

Class Summary
StockholmFileAnnotation Stores all the content parsed from the #=GF lines
StockholmFileAnnotation.StockholmFileAnnotationReference  
StockholmFileParser Stockholm file parser.
for more information about the format refer to ftp://ftp.sanger.ac.uk/pub/databases/Pfam/current_release/userman.txt. ftp://ftp.sanger.ac.uk/pub/databases/Rfam/CURRENT/USERMAN. http://sonnhammer.sbc.su.se/Stockholm.html.
StockholmStructure Stores all the content of a Stockholm file.
StockholmStructure.DatabaseReference