org.biojava.bio.structure.scop.server
Class XMLUtil

java.lang.Object
  org.biojava.bio.structure.scop.server.XMLUtil

public class XMLUtil
extends java.lang.Object

Utility classes for the XML serialization and de-serialization of SCOP.

Since:

3.0.2

Author:

Andreas Prlic

Constructor Summary

XMLUtil()

Method Summary

static java.util.SortedSet<java.lang.String>	getDomainRangesFromXML(java.lang.String xml)
static java.lang.String	getDomainRangesXML(java.util.SortedSet<java.lang.String> domainRanges)
static java.util.SortedSet<Domain>	getDomainsFromXML(java.lang.String xml)
static java.lang.String	getDomainsXML(java.util.SortedSet<Domain> domains)
static ScopDescription	getScopDescriptionFromXML(java.lang.String xml)
static java.lang.String	getScopDescriptionsXML(java.util.List<ScopDescription> descriptions)
static java.lang.String	getScopDescriptionXML(ScopDescription desc)
static ScopDomain	getScopDomainFromXML(java.lang.String xml)
static java.lang.String	getScopDomainsXML(java.util.List<ScopDomain> domains)
static java.lang.String	getScopDomainXML(ScopDomain domain)
static ScopNode	getScopNodeFromXML(java.lang.String xml)
static java.lang.String	getScopNodesXML(java.util.List<ScopNode> nodes)
static java.lang.String	getScopNodeXML(ScopNode scopNode)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

XMLUtil

public XMLUtil()

Method Detail

getScopDescriptionXML

public static java.lang.String getScopDescriptionXML(ScopDescription desc)

getScopDescriptionFromXML

public static ScopDescription getScopDescriptionFromXML(java.lang.String xml)

getScopDescriptionsXML

public static java.lang.String getScopDescriptionsXML(java.util.List<ScopDescription> descriptions)

getScopNodeXML

public static java.lang.String getScopNodeXML(ScopNode scopNode)

getScopNodeFromXML

public static ScopNode getScopNodeFromXML(java.lang.String xml)

getScopNodesXML

public static java.lang.String getScopNodesXML(java.util.List<ScopNode> nodes)

getScopDomainXML

public static java.lang.String getScopDomainXML(ScopDomain domain)

getScopDomainFromXML

public static ScopDomain getScopDomainFromXML(java.lang.String xml)

getScopDomainsXML

public static java.lang.String getScopDomainsXML(java.util.List<ScopDomain> domains)

getDomainsXML

public static java.lang.String getDomainsXML(java.util.SortedSet<Domain> domains)

getDomainsFromXML

public static java.util.SortedSet<Domain> getDomainsFromXML(java.lang.String xml)

getDomainRangesXML

public static java.lang.String getDomainRangesXML(java.util.SortedSet<java.lang.String> domainRanges)

getDomainRangesFromXML

public static java.util.SortedSet<java.lang.String> getDomainRangesFromXML(java.lang.String xml)