org.biojava.bio.structure.scop
Class ScopDomain

java.lang.Object
  org.biojava.bio.structure.scop.ScopDomain

All Implemented Interfaces:

java.io.Serializable, java.lang.Cloneable

public class ScopDomain
extends java.lang.Object
implements java.io.Serializable, java.lang.Cloneable

Container for the information for a domain. Contains a line in the file dir.cla.scop.txt_1.75 e.g d1dlwa_ 1dlw A: a.1.1.1 14982 cl=46456,cf=46457,sf=46458,fa=46459,dm=46460,sp=46461,px=14982

Author:

Andreas Prlic

See Also:

Serialized Form

Constructor Summary

ScopDomain()

Method Summary

protected java.lang.Object	clone()
int	getClassId()
java.lang.String	getClassificationId()
int	getDomainId()
int	getFamilyId()
int	getFoldId()
java.lang.String	getPdbId()
int	getPx()
java.util.List<java.lang.String>	getRanges()
java.lang.String	getScopId()
int	getSpeciesId()
java.lang.Integer	getSunid()
int	getSuperfamilyId()
void	setClassId(int classId)
void	setClassificationId(java.lang.String classificationId)
void	setDomainId(int domainId)
void	setFamilyId(int familyId)
void	setFoldId(int foldId)
void	setPdbId(java.lang.String pdbId)
void	setPx(int px)
void	setRanges(java.util.List<java.lang.String> ranges)
void	setScopId(java.lang.String scopId)
void	setSpeciesId(int speciesId)
void	setSunid(java.lang.Integer sunid)
void	setSuperfamilyId(int superfamilyId)
java.lang.String	toString()

Methods inherited from class java.lang.Object

equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

ScopDomain

public ScopDomain()

Method Detail

toString

public java.lang.String toString()

Overrides:

toString in class java.lang.Object

getScopId

public java.lang.String getScopId()

setScopId

public void setScopId(java.lang.String scopId)

getPdbId

public java.lang.String getPdbId()

setPdbId

public void setPdbId(java.lang.String pdbId)

getRanges

public java.util.List<java.lang.String> getRanges()

setRanges

public void setRanges(java.util.List<java.lang.String> ranges)

getClassificationId

public java.lang.String getClassificationId()

setClassificationId

public void setClassificationId(java.lang.String classificationId)

getSunid

public java.lang.Integer getSunid()

setSunid

public void setSunid(java.lang.Integer sunid)

getClassId

public int getClassId()

setClassId

public void setClassId(int classId)

getFoldId

public int getFoldId()

setFoldId

public void setFoldId(int foldId)

getSuperfamilyId

public int getSuperfamilyId()

setSuperfamilyId

public void setSuperfamilyId(int superfamilyId)

getFamilyId

public int getFamilyId()

setFamilyId

public void setFamilyId(int familyId)

getDomainId

public int getDomainId()

setDomainId

public void setDomainId(int domainId)

getSpeciesId

public int getSpeciesId()

setSpeciesId

public void setSpeciesId(int speciesId)

getPx

public int getPx()

setPx

public void setPx(int px)

clone

protected java.lang.Object clone()
                          throws java.lang.CloneNotSupportedException

Overrides:

clone in class java.lang.Object

Throws:

java.lang.CloneNotSupportedException