org.biojava.bio.structure.align.gui.jmol
Class JmolTools

java.lang.Object
  org.biojava.bio.structure.align.gui.jmol.JmolTools

public class JmolTools
extends java.lang.Object

Constructor Summary

JmolTools()

Method Summary

static java.lang.String	getPdbInfo(Atom a) get jmol style info: jmol style: [MET]508:A.CA/1 #3918 insertion code: [ASP]1^A:A.CA/1 #2
static java.lang.String	getPdbInfo(Atom a, boolean printResName)
static void	main(java.lang.String[] args)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

JmolTools

public JmolTools()

Method Detail

getPdbInfo

public static final java.lang.String getPdbInfo(Atom a)

get jmol style info: jmol style: [MET]508:A.CA/1 #3918 insertion code: [ASP]1^A:A.CA/1 #2

Parameters:

a - .. the Atom

Returns:

a String representation in Jmol style of the PDB information of this atom

main

public static void main(java.lang.String[] args)

getPdbInfo

public static final java.lang.String getPdbInfo(Atom a,
                                                boolean printResName)